STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733925_04648Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_000733925_04129
Unannotated protein.
  
     0.762
GCA_000733925_00811
Unannotated protein.
  
     0.760
GCA_000733925_01535
Unannotated protein.
  
     0.727
GCA_000733925_02430
Unannotated protein.
  
     0.687
GCA_000733925_04647
Unannotated protein.
       0.653
bshC
Unannotated protein; Belongs to the BshC family.
  
     0.641
GCA_000733925_01320
Unannotated protein; Belongs to the ClpS family.
  
     0.637
GCA_000733925_04570
Unannotated protein.
  
     0.614
ysdC
Unannotated protein.
  
     0.607
GCA_000733925_04649
Unannotated protein.
       0.596
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.