STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934745_00030Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_000934745_03236
Unannotated protein.
 
 
  
0.987
GCA_000934745_03242
Unannotated protein.
 
 
 0.913
GCA_000934745_03237
Unannotated protein.
 
 
 0.900
GCA_000934745_00092
Unannotated protein.
 
 
 0.838
GCA_000934745_01553
Unannotated protein.
 
  
 0.773
GCA_000934745_01986
Unannotated protein.
 
 
 0.750
GCA_000934745_02045
Unannotated protein.
 
 
 0.743
GCA_000934745_01115
Unannotated protein.
    
 0.737
GCA_000934745_01837
Unannotated protein.
     
 0.712
GCA_000934745_00029
Unannotated protein.
     
 0.699
Your Current Organism:
Desulfonatronum thioautotrophicum
NCBI taxonomy Id: 617001
Other names: D. thioautotrophicum, DSM 21337, Desulfonatronum sp. ASO3-6, Desulfonatronum sp. ASO4-1, Desulfonatronum thioautotrophicum Sorokin et al. 2011, UNIQEM U756, strain ASO4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.