STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934745_02201Unannotated protein. (68 aa)    
Predicted Functional Partners:
GCA_000934745_02817
Unannotated protein.
  
  
 0.909
GCA_000934745_02814
Unannotated protein.
  
  
 0.876
GCA_000934745_04088
Unannotated protein.
 
    0.719
GCA_000934745_04131
Unannotated protein.
  
    0.682
GCA_000934745_02194
Unannotated protein.
  
    0.677
GCA_000934745_02199
Unannotated protein.
 
    0.666
GCA_000934745_03783
Unannotated protein.
   
    0.663
GCA_000934745_02200
Unannotated protein.
 
     0.639
GCA_000934745_02202
Unannotated protein.
 
     0.557
GCA_000934745_03369
Unannotated protein.
   
    0.520
Your Current Organism:
Desulfonatronum thioautotrophicum
NCBI taxonomy Id: 617001
Other names: D. thioautotrophicum, DSM 21337, Desulfonatronum sp. ASO3-6, Desulfonatronum sp. ASO4-1, Desulfonatronum thioautotrophicum Sorokin et al. 2011, UNIQEM U756, strain ASO4-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.