STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934745_03906Unannotated protein. (224 aa)    
Predicted Functional Partners:
GCA_000934745_03907
Unannotated protein.
 
 
 0.944
GCA_000934745_03908
Unannotated protein.
       0.803
GCA_000934745_03904
Unannotated protein.
  
    0.788
GCA_000934745_03905
Unannotated protein.
  
    0.788
GCA_000934745_03909
Unannotated protein.
     
 0.784
GCA_000934745_03903
Unannotated protein.
  
    0.777
GCA_000934745_03490
Unannotated protein.
 
 
 0.738
GCA_000934745_00637
Unannotated protein.
 
 
 0.731
GCA_000934745_04227
Unannotated protein.
 
 
 0.730
GCA_000934745_04228
Unannotated protein.
 
 
 0.701
Your Current Organism:
Desulfonatronum thioautotrophicum
NCBI taxonomy Id: 617001
Other names: D. thioautotrophicum, DSM 21337, Desulfonatronum sp. ASO3-6, Desulfonatronum sp. ASO4-1, Desulfonatronum thioautotrophicum Sorokin et al. 2011, UNIQEM U756, strain ASO4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.