STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934745_04017Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_000934745_00027
Unannotated protein.
 
  
 0.961
GCA_000934745_01653
Unannotated protein.
 
 
 0.954
GCA_000934745_00466
Unannotated protein.
 
  
 0.952
GCA_000934745_00703
Unannotated protein.
 
 
 0.952
GCA_000934745_00429
Unannotated protein.
 
 
 0.913
GCA_000934745_03504
Unannotated protein.
 
 
 0.884
GCA_000934745_02845
Unannotated protein.
 
  
 0.880
GCA_000934745_00040
Unannotated protein.
   
    0.858
GCA_000934745_01707
Unannotated protein.
 
 
 0.856
GCA_000934745_03184
Unannotated protein.
 
  
 0.845
Your Current Organism:
Desulfonatronum thioautotrophicum
NCBI taxonomy Id: 617001
Other names: D. thioautotrophicum, DSM 21337, Desulfonatronum sp. ASO3-6, Desulfonatronum sp. ASO4-1, Desulfonatronum thioautotrophicum Sorokin et al. 2011, UNIQEM U756, strain ASO4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.