STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB07523.1Diguanylate cyclase (GGDEF) domain-containing protein. (800 aa)    
Predicted Functional Partners:
SDB10071.1
PAS domain S-box-containing protein.
0.997
SDB30844.1
PAS domain S-box-containing protein.
 0.997
SDB36735.1
PAS domain S-box-containing protein.
0.997
SDB45462.1
PAS domain S-box-containing protein.
0.997
SDB47071.1
PAS domain S-box-containing protein.
 0.997
SDB36748.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.996
SDB58280.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.996
SDB59148.1
PAS domain S-box-containing protein.
0.996
SDB01871.1
Signal transduction histidine kinase.
 
0.995
SDB03138.1
PAS domain S-box-containing protein.
 
0.995
Your Current Organism:
Desulfonatronum thiosulfatophilum
NCBI taxonomy Id: 617002
Other names: D. thiosulfatophilum, DSM 21338, Desulfonatronum sp. AHT30, Desulfonatronum sp. ASO4-2, Desulfonatronum thiosulfatophilum Sorokin et al. 2011, UNIQEM U757, strain ASO4-2
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