Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDB09645.1 | SDB18056.1 | SAMN05660653_00498 | SAMN05660653_00870 | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.525 |
| SDB09645.1 | SDB26269.1 | SAMN05660653_00498 | SAMN05660653_01254 | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | cysteinyl-tRNA synthetase. | 0.854 |
| SDB09645.1 | SDB35886.1 | SAMN05660653_00498 | SAMN05660653_01686 | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.857 |
| SDB09645.1 | SDB36325.1 | SAMN05660653_00498 | SAMN05660653_01714 | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | Hypothetical protein. | 0.771 |
| SDB09645.1 | SDB59019.1 | SAMN05660653_00498 | SAMN05660653_02995 | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | Uncharacterized iron-regulated protein. | 0.662 |
| SDB09645.1 | pepA | SAMN05660653_00498 | SAMN05660653_01534 | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.692 |
| SDB18056.1 | SDB09645.1 | SAMN05660653_00870 | SAMN05660653_00498 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | 0.525 |
| SDB18056.1 | SDB26269.1 | SAMN05660653_00870 | SAMN05660653_01254 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | cysteinyl-tRNA synthetase. | 0.764 |
| SDB18056.1 | SDB32538.1 | SAMN05660653_00870 | SAMN05660653_01543 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Aminomethyltransferase. | 0.896 |
| SDB18056.1 | SDB35886.1 | SAMN05660653_00870 | SAMN05660653_01686 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.433 |
| SDB18056.1 | SDB36325.1 | SAMN05660653_00870 | SAMN05660653_01714 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Hypothetical protein. | 0.471 |
| SDB18056.1 | glyA | SAMN05660653_00870 | SAMN05660653_02429 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.776 |
| SDB18056.1 | pepA | SAMN05660653_00870 | SAMN05660653_01534 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.702 |
| SDB26269.1 | SDB09645.1 | SAMN05660653_01254 | SAMN05660653_00498 | cysteinyl-tRNA synthetase. | 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains. | 0.854 |
| SDB26269.1 | SDB18056.1 | SAMN05660653_01254 | SAMN05660653_00870 | cysteinyl-tRNA synthetase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.764 |
| SDB26269.1 | SDB35886.1 | SAMN05660653_01254 | SAMN05660653_01686 | cysteinyl-tRNA synthetase. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.769 |
| SDB26269.1 | SDB36325.1 | SAMN05660653_01254 | SAMN05660653_01714 | cysteinyl-tRNA synthetase. | Hypothetical protein. | 0.662 |
| SDB26269.1 | SDB55188.1 | SAMN05660653_01254 | SAMN05660653_02748 | cysteinyl-tRNA synthetase. | Tricorn protease. | 0.496 |
| SDB26269.1 | SDB59019.1 | SAMN05660653_01254 | SAMN05660653_02995 | cysteinyl-tRNA synthetase. | Uncharacterized iron-regulated protein. | 0.519 |
| SDB26269.1 | glyA | SAMN05660653_01254 | SAMN05660653_02429 | cysteinyl-tRNA synthetase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.852 |
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