STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB41087.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
SDB41105.1
ATPase/GTPase, AAA15 family.
 
     0.951
SDB35900.1
Serine O-acetyltransferase.
 
 
 0.927
SDB25741.1
Hypothetical protein.
 
  
 0.814
SDB23234.1
PAP2 superfamily protein.
  
     0.766
SDB55165.1
Zinc dependent phospholipase C.
  
     0.765
SDB18601.1
O-antigen ligase.
  
     0.763
SDB25727.1
Predicted GTPase.
 
  
 0.763
SDB42178.1
Hypothetical protein.
  
     0.762
SDB04394.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.733
SDB51868.1
Flagellar hook-length control protein FliK.
  
     0.726
Your Current Organism:
Desulfonatronum thiosulfatophilum
NCBI taxonomy Id: 617002
Other names: D. thiosulfatophilum, DSM 21338, Desulfonatronum sp. AHT30, Desulfonatronum sp. ASO4-2, Desulfonatronum thiosulfatophilum Sorokin et al. 2011, UNIQEM U757, strain ASO4-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.