STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB49408.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
SDB41000.1
Hypothetical protein.
  
     0.708
SDB41051.1
Dissimilatory sulfite reductase beta subunit.
  
     0.637
SDB41069.1
Dissimilatory sulfite reductase alpha subunit.
  
     0.630
SDB11968.1
Dissimilatory adenylylsulfate reductase beta subunit.
  
   
 0.608
SDB56560.1
Dissimilatory adenylylsulfate reductase beta subunit.
  
   
 0.608
SDB12023.1
Quinone-modifying oxidoreductase subunit QmoB.
  
     0.539
SDB38069.1
Hypothetical protein.
 
   
 0.528
SDB11989.1
Dissimilatory adenylylsulfate reductase alpha subunit precursor.
 
     0.514
SDB49393.1
Molybdate transport system regulatory protein.
       0.463
SDB40938.1
4Fe-4S dicluster domain-containing protein.
  
     0.449
Your Current Organism:
Desulfonatronum thiosulfatophilum
NCBI taxonomy Id: 617002
Other names: D. thiosulfatophilum, DSM 21338, Desulfonatronum sp. AHT30, Desulfonatronum sp. ASO4-2, Desulfonatronum thiosulfatophilum Sorokin et al. 2011, UNIQEM U757, strain ASO4-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.