STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB53590.1beta-N-acetylhexosaminidase. (391 aa)    
Predicted Functional Partners:
SDB59355.1
Cellobiose phosphorylase.
    
 0.806
SDB37112.1
Uncharacterized conserved protein YbbC, DUF1343 family.
 
 
 0.787
SDB53579.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.671
SDB60943.1
acyl-CoA thioesterase-1.
    
 0.655
SDB12195.1
Hypothetical protein.
     
 0.586
SDB43032.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
    
  0.583
SDB29308.1
Hypothetical protein.
     
 0.578
SDB34005.1
Hypothetical protein.
   
 
 0.573
SDB44752.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
   
 
 0.532
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 
 0.521
Your Current Organism:
Desulfonatronum thiosulfatophilum
NCBI taxonomy Id: 617002
Other names: D. thiosulfatophilum, DSM 21338, Desulfonatronum sp. AHT30, Desulfonatronum sp. ASO4-2, Desulfonatronum thiosulfatophilum Sorokin et al. 2011, UNIQEM U757, strain ASO4-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.