STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB55378.1Rhodanese-like domain-containing protein. (574 aa)    
Predicted Functional Partners:
SDB55364.1
Methylamine utilisation protein MauE.
 
     0.938
SDB55388.1
Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family.
 
     0.814
SDB09589.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
  
 0.779
SDB55416.1
Histidine kinase.
 
     0.772
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.765
SDB48034.1
Glycosyl transferases group 1.
  
     0.750
SDB55404.1
STAS domain-containing protein.
 
     0.745
SDB55322.1
Transposase.
  
     0.723
SDB51868.1
Flagellar hook-length control protein FliK.
  
     0.720
SDB02639.1
Glycosyl transferases group 1.
  
     0.717
Your Current Organism:
Desulfonatronum thiosulfatophilum
NCBI taxonomy Id: 617002
Other names: D. thiosulfatophilum, DSM 21338, Desulfonatronum sp. AHT30, Desulfonatronum sp. ASO4-2, Desulfonatronum thiosulfatophilum Sorokin et al. 2011, UNIQEM U757, strain ASO4-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.