Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB53449.1 | SDB55145.1 | SAMN05660653_02647 | SAMN05660653_02744 | Antitoxin VapB. | Hypothetical protein. | 0.859 |
SDB53449.1 | SDB60375.1 | SAMN05660653_02647 | SAMN05660653_03092 | Antitoxin VapB. | Antitoxin VapB. | 0.448 |
SDB53449.1 | SDB60383.1 | SAMN05660653_02647 | SAMN05660653_03093 | Antitoxin VapB. | tRNA(fMet)-specific endonuclease VapC. | 0.943 |
SDB53449.1 | vapC | SAMN05660653_02647 | SAMN05660653_00540 | Antitoxin VapB. | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.936 |
SDB53449.1 | vapC-2 | SAMN05660653_02647 | SAMN05660653_02648 | Antitoxin VapB. | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.990 |
SDB55145.1 | SDB53449.1 | SAMN05660653_02744 | SAMN05660653_02647 | Hypothetical protein. | Antitoxin VapB. | 0.859 |
SDB55145.1 | SDB60375.1 | SAMN05660653_02744 | SAMN05660653_03092 | Hypothetical protein. | Antitoxin VapB. | 0.864 |
SDB55145.1 | vapC | SAMN05660653_02744 | SAMN05660653_00540 | Hypothetical protein. | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.426 |
SDB60375.1 | SDB53449.1 | SAMN05660653_03092 | SAMN05660653_02647 | Antitoxin VapB. | Antitoxin VapB. | 0.448 |
SDB60375.1 | SDB55145.1 | SAMN05660653_03092 | SAMN05660653_02744 | Antitoxin VapB. | Hypothetical protein. | 0.864 |
SDB60375.1 | SDB60383.1 | SAMN05660653_03092 | SAMN05660653_03093 | Antitoxin VapB. | tRNA(fMet)-specific endonuclease VapC. | 0.995 |
SDB60375.1 | vapC | SAMN05660653_03092 | SAMN05660653_00540 | Antitoxin VapB. | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.978 |
SDB60375.1 | vapC-2 | SAMN05660653_03092 | SAMN05660653_02648 | Antitoxin VapB. | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.977 |
SDB60383.1 | SDB53449.1 | SAMN05660653_03093 | SAMN05660653_02647 | tRNA(fMet)-specific endonuclease VapC. | Antitoxin VapB. | 0.943 |
SDB60383.1 | SDB60375.1 | SAMN05660653_03093 | SAMN05660653_03092 | tRNA(fMet)-specific endonuclease VapC. | Antitoxin VapB. | 0.995 |
vapC | SDB53449.1 | SAMN05660653_00540 | SAMN05660653_02647 | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Antitoxin VapB. | 0.936 |
vapC | SDB55145.1 | SAMN05660653_00540 | SAMN05660653_02744 | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein. | 0.426 |
vapC | SDB60375.1 | SAMN05660653_00540 | SAMN05660653_03092 | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Antitoxin VapB. | 0.978 |
vapC-2 | SDB53449.1 | SAMN05660653_02648 | SAMN05660653_02647 | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Antitoxin VapB. | 0.990 |
vapC-2 | SDB60375.1 | SAMN05660653_02648 | SAMN05660653_03092 | tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Antitoxin VapB. | 0.977 |