Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000000063Uncharacterized protein. (573 aa)    
Predicted Functional Partners:
ENSACIP00000004650
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.767
ENSACIP00000003106
Fraser extracellular matrix complex subunit 1.
    
 0.734
ENSACIP00000006665
Fras1 related extracellular matrix 1b.
    
 0.733
ENSACIP00000018345
Fras1 related extracellular matrix 1a.
    
 0.733
RIMS2
Regulating synaptic membrane exocytosis 2.
     
  0.714
ENSACIP00000009497
PDZ domain-containing protein.
     
  0.714
RANBP2
RAN binding protein 2.
    
  0.623
ENSACIP00000012233
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.607
ENSACIP00000009643
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.557
ENSACIP00000016494
Ubinuclein 1.
    
 0.528
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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