Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000000065Synaptotagmin IIa. (430 aa)    
Predicted Functional Partners:
ENSACIP00000008892
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.939
ENSACIP00000015438
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.939
VAMP3
Vesicle associated membrane protein 3.
    
 0.910
ENSACIP00000015673
Zgc:92912.
   
 0.905
ENSACIP00000018353
Vesicle-associated membrane protein 2.
   
 0.905
ENSACIP00000025303
Vesicle-associated membrane protein 1.
   
 0.905
ENSACIP00000005446
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.840
ENSACIP00000001293
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.827
ENSACIP00000002096
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.827
STX3
Syntaxin 3; Belongs to the syntaxin family.
   
 0.827
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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