Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001000Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
ENSACIP00000009258
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
   0.710
ENSACIP00000012482
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
    
   0.571
ENSACIP00000019545
Mago homolog, exon junction complex subunit.
    
 
 0.565
ENSACIP00000010933
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 
 0.563
ENSACIP00000004961
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
   0.535
ENSACIP00000017231
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
   0.478
ENSACIP00000009398
DEAF1 transcription factor.
      
 0.472
ENSACIP00000004678
Ankyrin repeat domain 6b.
    
 
 0.471
ENSACIP00000007340
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.470
ENSACIP00000018190
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.470
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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