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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001006Staufen double-stranded RNA binding protein 2. (608 aa)    
Predicted Functional Partners:
ENSACIP00000001101
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
    
 0.964
ENSACIP00000024954
Drosha ribonuclease III.
    
 0.911
ENSACIP00000014853
Mitochondrial ribosomal protein L44.
    
 0.896
ENSACIP00000001460
Argonaute RISC catalytic component 2; Belongs to the argonaute family.
    
 0.737
ENSACIP00000006715
ArgoN domain-containing protein.
    
 0.737
ENSACIP00000006752
Argonaute RISC component 1; Belongs to the argonaute family.
    
 0.737
ENSACIP00000006757
Uncharacterized protein.
    
 0.737
ENSACIP00000006805
Argonaute RISC catalytic component 3a; Belongs to the argonaute family.
    
 0.737
EIF2C4
Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily.
    
 0.737
ENSACIP00000018710
ArgoN domain-containing protein.
    
 0.737
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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