STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL2Fidgetin like 2. (699 aa)    
Predicted Functional Partners:
ENSACIP00000006749
IST1 factor associated with ESCRT-III.
    
 0.942
ENSACIP00000017383
Si:dkey-97o5.1.
   
 0.879
ENSACIP00000018421
UBX domain-containing protein 7.
   
 0.870
SPIDR
Scaffold protein involved in DNA repair.
    
 0.841
ENSACIP00000001813
NDK domain-containing protein.
   
 0.829
ENSACIP00000015207
Charged multivesicular body protein 1A.
    
 0.817
ENSACIP00000017343
Uncharacterized protein.
    
 0.817
ENSACIP00000017372
Chromatin modifying protein 1B.
    
 0.817
ENSACIP00000005717
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
  
 0.812
ENSACIP00000001549
Vesicle (multivesicular body) trafficking 1.
    
 0.765
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.