STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001047Retinoic acid receptor, alpha a. (454 aa)    
Predicted Functional Partners:
ENSACIP00000016056
Zinc finger and BTB domain containing 16a.
    
 0.875
ENSACIP00000001719
Retinoid X receptor, alpha a.
   
 0.853
ENSACIP00000017716
Uncharacterized protein.
   
 0.853
ENSACIP00000022179
Retinoid x receptor, beta b.
   
 0.853
ENSACIP00000031671
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.845
ENSACIP00000007134
Spi-1 proto-oncogene b.
    
 0.837
ENSACIP00000006804
Nuclear receptor interacting protein 1b.
    
 0.792
ENSACIP00000014054
Uncharacterized protein.
    
 0.751
ENSACIP00000025884
Nuclear receptor corepressor 2.
    
 0.751
ENSACIP00000014136
GPS2_interact domain-containing protein.
    
 0.699
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.