Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001052Sarcoglycan, epsilon. (395 aa)    
Predicted Functional Partners:
ENSACIP00000029600
Sarcoglycan, gamma.
   
 0.993
ENSACIP00000000132
Sarcospan (Kras oncogene-associated gene).
   
 0.989
ENSACIP00000030388
Sarcoglycan, beta (dystrophin-associated glycoprotein).
    
 0.987
ENSACIP00000020450
Dystroglycan 1.
    
 0.979
ENSACIP00000026342
Peptidase S72 domain-containing protein.
    
 0.979
SGCZ
Sarcoglycan zeta.
   
 0.971
ENSACIP00000014743
Uncharacterized protein.
   
 0.971
ENSACIP00000024417
Sarcoglycan, delta (dystrophin-associated glycoprotein).
   
 0.971
ENSACIP00000011158
Sarcoglycan, alpha.
     
 
0.935
ENSACIP00000015302
Syntrophin, beta 2.
    
 0.846
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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