Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001105BMERB domain-containing protein. (239 aa)    
Predicted Functional Partners:
ENSACIP00000009401
Calponin-homology (CH) domain-containing protein.
 
      0.896
ENSACIP00000009378
BMERB domain-containing protein.
     
  0.834
EIF3L
Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
 
   
  0.816
ENSACIP00000009529
Jumping translocation breakpoint.
     
  0.808
ENSACIP00000011091
Alpha-amylase.
     
  0.800
ENSACIP00000000499
Actinin alpha 3b.
    
  0.797
ENSACIP00000009187
Actinin, alpha 2b.
    
  0.797
ENSACIP00000015521
Uncharacterized protein.
    
  0.797
ENSACIP00000015567
Actinin, alpha 1.
    
  0.797
ACTN4
Actinin alpha 4.
    
  0.797
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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