STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001112Transmembrane protein 266. (543 aa)    
Predicted Functional Partners:
ENSACIP00000024380
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
   0.732
ENSACIP00000029269
Transforming growth factor, beta receptor associated protein 1.
    
   0.715
ENSACIP00000021502
Uncharacterized protein.
      
 0.689
ENSACIP00000010857
Aldehyde dehydrogenase 16 family, member A1.
      
 0.641
ENSACIP00000008796
Solute carrier family 35 member F4.
      
 0.640
ENSACIP00000027617
Potassium voltage-gated channel, Isk-related family, member 4.
      
 0.639
ENSACIP00000021816
Uncharacterized protein.
      
 0.637
ENSACIP00000019106
Eukaryotic translation termination factor 1b.
      
 0.624
ENSACIP00000012474
Apoptosis inducing factor mitochondrion associated 1.
      
 0.618
ENSACIP00000008941
Solute carrier family 2 member 15b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.573
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.