STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001121BSD domain-containing protein. (344 aa)    
Predicted Functional Partners:
ENSACIP00000030495
Peptidyl-prolyl cis-trans isomerase.
    
   0.909
ENSACIP00000001567
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.684
ENSACIP00000012059
Hdc homolog, cell cycle regulator.
      
 0.626
ENSACIP00000012032
Nucleolar complex associated 4 homolog.
      
 0.615
ENSACIP00000019106
Eukaryotic translation termination factor 1b.
   
   0.580
ENSACIP00000002958
Uncharacterized protein.
    
   0.553
ENSACIP00000015202
MAP7 domain containing 3.
    
   0.553
ENSACIP00000021729
Peptidyl-prolyl cis-trans isomerase.
    
   0.550
ENSACIP00000012459
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.549
ENSACIP00000028812
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog.
   
  
 0.525
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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