STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001124SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1104 aa)    
Predicted Functional Partners:
ENSACIP00000005503
Bromodomain containing 7.
   
 0.990
ENSACIP00000016361
Actin-like 6A; Belongs to the actin family.
   
 0.989
ENSACIP00000025215
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.987
ENSACIP00000010134
PHD finger protein 10.
    
 0.986
ENSACIP00000025793
Polybromo 1.
  
 0.986
ENSACIP00000017444
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
   
 0.985
ENSACIP00000020615
Polybromo 1, like.
   
 0.983
ENSACIP00000018214
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
    
 0.978
ENSACIP00000019794
Bromodomain containing 9.
   
 0.978
ENSACIP00000025116
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.978
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.