Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001130Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
ENSACIP00000018953
Uncharacterized protein.
  
     0.499
ENSACIP00000010357
Dynein light chain.
  
     0.497
ENSACIP00000021494
Uncharacterized protein.
  
     0.489
ENSACIP00000003298
Dynein light chain.
  
     0.481
ENSACIP00000029098
Uncharacterized protein.
  
     0.481
ENSACIP00000008181
Uncharacterized protein.
  
     0.457
ENSACIP00000001639
Uncharacterized protein.
  
     0.443
ENSACIP00000023669
Dynein light chain.
  
     0.410
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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