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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001154ADP-ribosylation factor-like 4ab. (201 aa)    
Predicted Functional Partners:
ENSACIP00000010936
Intersectin 2b.
    
 0.879
ENSACIP00000022471
SH3 domain-containing protein.
    
 0.879
ENSACIP00000022500
Uncharacterized protein.
    
 0.879
ENSACIP00000001574
Uncharacterized protein.
   
 0.835
ENSACIP00000024340
Uncharacterized protein.
   
 0.835
ENSACIP00000020070
Intersectin 1 (SH3 domain protein).
    
 0.830
ENSACIP00000022461
Uncharacterized protein.
    
 0.830
ENSACIP00000025794
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.799
ENSACIP00000009211
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.794
ENSACIP00000004473
Cyclin G associated kinase.
    
 0.784
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.