STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001159Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
ENSACIP00000004126
Ribosomal protein S27a.
    
  0.526
ENSACIP00000027620
Zinc finger, AN1-type domain 4.
    
  0.488
ENSACIP00000004650
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.476
ENSACIP00000005788
Ubiquitin-like domain-containing protein.
    
  0.467
ENSACIP00000008454
Ubiquitin-like domain-containing protein.
    
  0.467
ENSACIP00000008512
Ubiquitin-like domain-containing protein.
    
  0.467
ENSACIP00000008550
Ubiquitin-like domain-containing protein.
    
  0.467
ENSACIP00000008625
Ubiquitin-like domain-containing protein.
    
  0.467
ENSACIP00000010389
Uncharacterized protein.
    
  0.467
ENSACIP00000014528
Uncharacterized protein.
    
  0.467
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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