STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001165THO complex 6. (324 aa)    
Predicted Functional Partners:
ENSACIP00000011212
THO complex 7.
    
 0.999
ENSACIP00000013316
THO complex 3.
   
 0.999
ENSACIP00000019370
THO complex 2.
    
 0.999
ENSACIP00000025152
THO complex 1.
    
 0.999
ENSACIP00000025904
THO complex 5.
   
 0.999
ENSACIP00000008099
Aly/REF export factor.
   
 0.991
ENSACIP00000026277
RRM domain-containing protein.
   
 0.965
ENSACIP00000001495
Zinc finger CCCH-type containing 13.
    
 0.953
ENSACIP00000005755
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B.
   
 0.950
ENSACIP00000010154
Uncharacterized protein.
   
 0.950
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.