STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001185F-box domain-containing protein. (441 aa)    
Predicted Functional Partners:
ENSACIP00000006666
Calcium homeostasis modulator family member 6.
   
    0.796
ENSACIP00000018634
C19h1orf109 homolog (H. sapiens).
   
    0.790
ENSACIP00000017602
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.763
ENSACIP00000031271
THAP-type domain-containing protein.
   
    0.736
FBXO48
F-box protein 48.
      
 0.733
ENSACIP00000005915
Zgc:56556.
   
    0.732
ENSACIP00000012971
Uncharacterized protein.
      
 0.730
ENSACIP00000021972
Uncharacterized protein.
   
    0.722
ENSACIP00000012574
Calcium homeostasis modulator family member 5, tandem duplicate 2.
   
    0.721
LIX1L
Limb and CNS expressed 1 like.
   
    0.716
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.