Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001199Transmembrane protein 244. (174 aa)    
Predicted Functional Partners:
ENSACIP00000025158
Transmembrane protein 141.
      
 0.881
ENSACIP00000019616
tRNA pseudouridine synthase.
      
 0.760
ENSACIP00000001840
Arginine/serine-rich coiled-coil 1.
      
 0.734
ENSACIP00000024568
Synaptosome associated protein 47.
      
 0.724
ENSACIP00000000197
Uncharacterized protein.
      
 0.679
ENSACIP00000024456
TIMP metallopeptidase inhibitor 4, tandem duplicate 1.
      
 0.636
ENSACIP00000023436
Kinesin family member 16Ba; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.634
ENSACIP00000007364
Upper zone of growth plate and cartilage matrix associated a.
      
 0.593
ENSACIP00000024944
Upper zone of growth plate and cartilage matrix associated b.
      
 0.593
ENSACIP00000028336
Ly6 domain containing, pigment cell.
      
 0.558
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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