Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP62Nucleoporin 62. (549 aa)    
Predicted Functional Partners:
NUP54
Nucleoporin 54.
   
 0.999
ENSACIP00000003934
Nucleoporin 58.
   
 0.998
ENSACIP00000006550
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.998
ENSACIP00000013906
Nucleoporin 153.
   
 0.995
ENSACIP00000030743
Nucleoporin 43.
   
 0.995
ENSACIP00000031116
Nucleoporin 88.
   
 0.995
ENSACIP00000017430
Nucleoporin 98.
   
 0.994
ENSACIP00000017533
Nucleoporin 37.
    
 0.994
ENSACIP00000023331
Uncharacterized protein.
   
 0.993
RANBP2
RAN binding protein 2.
   
 0.992
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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