Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TPM1Uncharacterized protein; Belongs to the tropomyosin family. (288 aa)    
Predicted Functional Partners:
ENSACIP00000018216
Troponin T2c, cardiac.
   
 0.920
ENSACIP00000003622
Uncharacterized protein.
   
 0.897
ENSACIP00000013083
Troponin T type 2b (cardiac).
   
 0.897
ENSACIP00000013122
Uncharacterized protein.
   
 0.897
ENSACIP00000019258
Troponin T type 2a (cardiac).
   
 0.897
ENSACIP00000028208
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.881
ENSACIP00000013112
Troponin I type 1b (skeletal, slow).
   
 0.875
ENSACIP00000019433
Troponin I type 1a (skeletal, slow).
   
 0.875
ENSACIP00000003649
Troponin I4b, tandem duplicate 2.
   
 0.831
ENSACIP00000028041
Trafficking from ER to golgi regulator.
   
 0.829
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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