STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001243Uncharacterized protein. (56 aa)    
Predicted Functional Partners:
ENSACIP00000004974
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.802
EIF3J
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
      
 0.636
ENSACIP00000016896
Ring finger and CCCH-type domains 1b.
    
   0.545
ENSACIP00000030050
Uncharacterized protein.
      
 0.535
ENSACIP00000015637
Eukaryotic translation initiation factor 4 gamma, 3a.
    
 
 0.509
ENSACIP00000019038
Uncharacterized protein.
    
 
 0.509
ENSACIP00000026192
Poly(A) binding protein interacting protein 1.
    
 
 0.509
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
    
 
 0.509
ENSACIP00000027177
Uncharacterized protein.
    
 
 0.509
ENSACIP00000000258
Eukaryotic translation initiation factor 4, gamma 2a.
    
 
 0.452
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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