STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001249Uncharacterized protein. (1153 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.962
ENSACIP00000009497
PDZ domain-containing protein.
   
 0.962
ENSACIP00000001274
C2 domain-containing protein.
 
      0.899
ENSACIP00000003338
Regulating synaptic membrane exocytosis 3.
    
 0.785
ENSACIP00000009674
C2 domain-containing protein.
 
      0.785
ENSACIP00000014655
Regulating synaptic membrane exocytosis 1a.
    
 0.785
ENSACIP00000014759
C2 domain-containing protein.
    
 0.785
ENSACIP00000031209
PDZ domain-containing protein.
    
 0.785
ENSACIP00000009467
C2 domain-containing protein.
    
 0.768
ENSACIP00000008892
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.698
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.