Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001276TMEM9 domain family, member B. (171 aa)    
Predicted Functional Partners:
ENSACIP00000005394
Transmembrane protein 53.
      
 0.639
ENSACIP00000001314
WWC family member 3.
    
 
 0.632
ENSACIP00000006157
Chloride channel protein.
    
 
 0.632
ENSACIP00000006173
Uncharacterized protein.
    
 
 0.632
ENSACIP00000024803
WW and C2 domain containing 1.
    
 
 0.632
ENSACIP00000028004
Chloride channel protein.
    
 
 0.632
ENSACIP00000030438
Chloride channel protein.
    
 
 0.632
ENSACIP00000015936
Transmembrane protein 214.
      
 0.615
ENSACIP00000013886
RNA binding motif protein 42.
      
 0.610
ENSACIP00000006389
DENN/MADD domain containing 5B.
      
 0.601
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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