Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000001287Peptidylprolyl isomerase. (299 aa)    
Predicted Functional Partners:
ENSACIP00000016441
CDK5 regulatory subunit associated protein 3.
    
   0.974
ENSACIP00000017342
NBR1 autophagy cargo receptor a.
    
 0.896
ENSACIP00000024243
NBR1 autophagy cargo receptor b.
    
 0.896
ENSACIP00000006778
PIH1 domain containing 1.
      
 0.857
ENSACIP00000030382
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.855
ENSACIP00000029846
Uncharacterized protein.
    
  0.836
ENSACIP00000031444
Tudor domain containing 9.
  
 0.822
ENSACIP00000002771
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.800
ENSACIP00000003502
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.800
ENSACIP00000013273
Tudor and KH domain containing.
     
 0.800
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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