STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001293Syntaxin 1B; Belongs to the syntaxin family. (269 aa)    
Predicted Functional Partners:
ENSACIP00000008139
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.987
VAMP3
Vesicle associated membrane protein 3.
    
 0.985
ENSACIP00000008892
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.982
ENSACIP00000015438
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.982
ENSACIP00000017967
Vesicle-associated membrane protein 4.
    
 0.982
ENSACIP00000017073
Uncharacterized protein.
    
 0.962
ENSACIP00000015673
Zgc:92912.
   
 0.959
ENSACIP00000018353
Vesicle-associated membrane protein 2.
   
 0.959
ENSACIP00000025303
Vesicle-associated membrane protein 1.
   
 0.959
ENSACIP00000024094
Synaptosome associated protein 29.
   
 0.944
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.