Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001340Distal-less homeobox 1a. (251 aa)    
Predicted Functional Partners:
ENSACIP00000001321
Distal-less homeobox 2b.
   
 
 0.884
ENSACIP00000002009
Pre-B-cell leukemia homeobox 2.
   
 
 0.753
ENSACIP00000019910
Pre-B-cell leukemia homeobox 1a.
   
 
 0.753
ENSACIP00000020000
Homeobox domain-containing protein.
   
 
 0.753
ENSACIP00000021731
Pre-B-cell leukemia transcription factor 4.
   
 
 0.753
ENSACIP00000027075
Homeobox domain-containing protein.
   
 
 0.753
ENSACIP00000016681
Iroquois homeobox 1b.
   
 
 0.725
ENSACIP00000018106
Iroquois homeobox 1a.
   
 
 0.725
ENSACIP00000017314
Achaete-scute family bHLH transcription factor 1a.
   
  
 0.716
ENSACIP00000006736
Forkhead box G1a.
   
 
 0.697
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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