Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001345Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
ENSACIP00000028274
Zgc:66024.
   
  
 0.604
ENSACIP00000011592
Uncharacterized protein.
  
     0.478
ENSACIP00000018204
Uncharacterized protein.
  
     0.468
ENSACIP00000016849
Uncharacterized protein.
  
     0.459
ENSACIP00000029804
Uncharacterized protein.
  
     0.458
ENSACIP00000006005
Uncharacterized protein.
  
     0.445
ENSACIP00000002980
Si:ch211-114c12.2.
  
     0.442
ENSACIP00000005410
Uncharacterized protein.
  
     0.434
ENSACIP00000018615
Uncharacterized protein.
  
     0.433
ENSACIP00000025706
Si:ch211-212k18.5.
  
     0.423
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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