Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001392Kelch-like family member 43. (684 aa)    
Predicted Functional Partners:
ENSACIP00000018421
UBX domain-containing protein 7.
    
  0.610
ENSACIP00000007832
Bardet-Biedl syndrome 9.
    
 0.581
ENSACIP00000009943
Tetratricopeptide repeat domain 8.
    
 0.561
ENSACIP00000024327
Bardet-Biedl syndrome 7.
    
 0.537
ENSACIP00000021174
BBSome interacting protein 1.
    
  0.495
ENSACIP00000002504
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.471
ENSACIP00000018368
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.461
ENSACIP00000003379
Cullin 1b; Belongs to the cullin family.
    
 0.453
ENSACIP00000004913
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.453
ENSACIP00000006062
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.453
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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