Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000001396Si:ch211-220f12.4. (391 aa)    
Predicted Functional Partners:
ENSACIP00000016182
Methyl-CpG binding domain protein 2.
    
   0.764
ENSACIP00000019366
Methyl-CpG binding domain protein 3a.
    
   0.764
ENSACIP00000004264
Small integral membrane protein 12.
      
 0.759
ENSACIP00000006707
Ribosomal protein S6 kinase polypeptide 1.
      
 0.749
ENSACIP00000004233
Ly1 antibody reactive homolog (mouse).
    
   0.737
ENSACIP00000016955
Otolin 1a.
      
 0.735
ENSACIP00000013769
Proteasome inhibitor subunit 1.
    
   0.713
ENSACIP00000012827
T cell activation inhibitor, mitochondrial.
      
 0.712
ENSACIP00000025217
Leucine rich repeat containing 40.
      
 0.703
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
      
 0.680
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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