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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001404Matrix metallopeptidase 21; Belongs to the peptidase M10A family. (596 aa)    
Predicted Functional Partners:
ENSACIP00000016154
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
  0.841
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.792
ENSACIP00000002029
TIMP metallopeptidase inhibitor 2b.
    
 0.792
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.776
ENSACIP00000024456
TIMP metallopeptidase inhibitor 4, tandem duplicate 1.
    
 0.682
ENSACIP00000007791
Nidogen 1a.
     
 0.630
ENSACIP00000019235
Nidogen 1b.
     
 0.630
ENSACIP00000023974
Nidogen 2a (osteonidogen).
     
 0.630
ENSACIP00000027270
Matrix metallopeptidase 13b.
   
0.568
ENSACIP00000027413
Matrix metallopeptidase 20a (enamelysin).
   
0.568
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.