Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001418LIM domain-containing protein. (325 aa)    
Predicted Functional Partners:
ENSACIP00000029399
Ras suppressor protein 1.
   
 0.981
ENSACIP00000015446
Uncharacterized protein.
   
 0.958
ILK
Integrin linked kinase.
   
 0.958
ENSACIP00000000359
Parvin, alpha a.
   
 0.944
ENSACIP00000001958
Parvin, beta.
   
 0.944
ENSACIP00000002016
Parvin, gamma.
   
 0.938
ENSACIP00000005821
Fermitin family member 1.
   
 
 0.801
ENSACIP00000019765
Fermitin family member 2.
   
 
 0.801
ENSACIP00000006679
P53-induced death domain protein 1.
    
  0.694
ENSACIP00000028930
Fermitin family member 3b.
   
 
 0.686
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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