STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001422Clock circadian regulator b. (822 aa)    
Predicted Functional Partners:
ENSACIP00000000183
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
0.902
ENSACIP00000007825
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
0.902
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
0.902
ENSACIP00000023844
Cryptochrome circadian regulator 3a.
    
 0.862
ENSACIP00000000399
Period circadian clock 3.
    
0.849
PER2
Period circadian regulator 2.
    
0.849
ENSACIP00000019587
Period circadian clock 2.
    
0.849
ENSACIP00000021955
Period circadian clock 1b.
    
0.849
ENSACIP00000007335
PAS domain-containing protein.
    
 0.836
ENSACIP00000013456
Neuronal PAS domain protein 4a.
    
0.836
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.