STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001432Achaete-scute family bHLH transcription factor 1b. (176 aa)    
Predicted Functional Partners:
ENSACIP00000030549
Inhibitor of DNA binding 2a.
    
 0.869
ENSACIP00000002913
Transcription factor 12.
   
 0.848
ENSACIP00000019127
Transcription factor 3b.
   
 0.848
ENSACIP00000023074
Transcription factor 3a.
   
 0.848
TCF4
Transcription factor 4.
   
 0.848
ENSACIP00000019510
BHLH domain-containing protein.
   
 0.839
ENSACIP00000003641
Hairy-related 8.2.
    
 0.737
ENSACIP00000005048
Hairy-related 9.
    
 0.737
ENSACIP00000016407
Hairy-related 6.
    
 0.737
ENSACIP00000028374
Uncharacterized protein.
    
 0.737
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.