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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001432Achaete-scute family bHLH transcription factor 1b. (176 aa)    
Predicted Functional Partners:
ENSACIP00000002913
Transcription factor 12.
   
 0.837
ENSACIP00000019127
Transcription factor 3b.
   
 0.837
ENSACIP00000019510
BHLH domain-containing protein.
   
 0.837
ENSACIP00000023074
Transcription factor 3a.
   
 0.837
TCF4
Transcription factor 4.
   
 0.837
ENSACIP00000030549
Inhibitor of DNA binding 2a.
    
 0.697
ENSACIP00000010482
LIM-domain binding 1b.
    
 0.606
ENSACIP00000022556
LIM domain binding 2a.
    
 0.606
ENSACIP00000029076
LIM domain binding 1a.
    
 0.606
ENSACIP00000001036
ISL LIM homeobox 2a.
   
 0.549
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.