STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001449Otopetrin 2. (542 aa)    
Predicted Functional Partners:
ENSACIP00000004254
Transmembrane protein 107.
      
 0.639
HID1
HID1 domain containing.
      
 0.631
ENSACIP00000016264
Uncharacterized protein.
      
 0.631
ENSACIP00000001347
Usher syndrome 1Ga (autosomal recessive).
      
 0.625
ENSACIP00000005742
Usher syndrome 1Gb (autosomal recessive).
      
 0.625
SLC26A9
Solute carrier family 26 member 9; DIDS- and thiosulfate- sensitive anion exchanger mediating chloride, sulfate and oxalate transport. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.615
ENSACIP00000029740
Ankyrin repeat and sterile alpha motif domain containing 4B.
      
 0.461
ENSACIP00000029749
Ankyrin repeat and sterile alpha motif domain containing 4B.
      
 0.461
ENSACIP00000015918
Uncharacterized protein.
      
 0.454
ENSACIP00000027652
Hydrogen voltage-gated channel 1.
      
 0.452
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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