Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ENSACIP00000001450Chromodomain helicase DNA binding protein 1-like. (872 aa)    
Predicted Functional Partners:
ENSACIP00000007255
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 0.995
ENSACIP00000001067
X-ray repair complementing defective repair in Chinese hamster cells 1.
    
 0.980
ENSACIP00000027468
X-ray repair complementing defective repair in Chinese hamster cells 6.
   
 
 0.976
RNF146
Ring finger protein 146.
    
 
 0.974
ENSACIP00000016360
Poly [ADP-ribose] polymerase.
    
 0.973
ENSACIP00000021625
Xeroderma pigmentosum, complementation group C.
    
 0.964
ENSACIP00000022382
Xeroderma pigmentosum, complementation group A.
    
 0.959
ENSACIP00000012372
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.949
ENSACIP00000003413
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.943
ENSACIP00000006595
Helicase-like transcription factor.
  
 
0.933
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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