Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACIP00000001462MINDY lysine 48 deubiquitinase 1. (296 aa)    
Predicted Functional Partners:
ENSACIP00000006473
Methylmalonyl CoA mutase.
    
 0.807
ENSACIP00000020155
SET domain containing 4.
    
 0.807
ENSACIP00000028549
Protein-histidine N-methyltransferase.
    
 0.807
ENSACIP00000017511
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
     
  0.800
ENSACIP00000004126
Ribosomal protein S27a.
    
   0.799
ENSACIP00000010389
Uncharacterized protein.
    
   0.774
ENSACIP00000014474
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 
 0.687
ENSACIP00000025696
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 
 0.674
RNF126
Ring finger protein 126.
    
  0.673
ENSACIP00000023521
Ring finger protein 126.
    
  0.673
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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