STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS8Galectin. (289 aa)    
Predicted Functional Partners:
ENSACIP00000015872
SKICH domain-containing protein.
    
 
 0.901
ENSACIP00000003104
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
   
 
 0.574
ENSACIP00000001653
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 
 0.487
ENSACIP00000021123
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
   
 
 0.466
ENSACIP00000002110
FAM20A golgi associated secretory pathway pseudokinase.
    
 0.461
ENSACIP00000010080
FAM20B glycosaminoglycan xylosylkinase.
    
 0.439
ENSACIP00000005146
Vacuolar protein sorting 13 homolog A.
   
 
 0.419
ENSACIP00000009783
Vacuolar protein sorting 13 homolog C.
   
 
 0.419
ENSACIP00000013379
Uncharacterized protein.
   
 
 0.419
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.