STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD3Low density lipoprotein receptor class A domain containing 3. (352 aa)    
Predicted Functional Partners:
ENSACIP00000020070
Intersectin 1 (SH3 domain protein).
    
 0.786
ENSACIP00000007774
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.724
ENSACIP00000015327
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
    
 
 0.721
ENSACIP00000010695
Sema domain-containing protein.
    
  0.709
ENSACIP00000010723
Protein kinase domain-containing protein.
    
  0.709
ENSACIP00000012782
Macrophage stimulating 1 receptor b.
    
  0.709
ENSACIP00000028602
MET proto-oncogene, receptor tyrosine kinase.
    
  0.709
ENSACIP00000010936
Intersectin 2b.
    
 0.697
ENSACIP00000022471
SH3 domain-containing protein.
    
 0.697
ENSACIP00000022500
Uncharacterized protein.
    
 0.697
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.