STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001485Translocated promoter region a, nuclear basket protein. (1801 aa)    
Predicted Functional Partners:
ENSACIP00000013906
Nucleoporin 153.
   
 0.988
ENSACIP00000017430
Nucleoporin 98.
   
 0.973
ENSACIP00000013354
Nucleoporin 205.
   
 0.969
ENSACIP00000023643
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.968
ENSACIP00000006550
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.966
ENSACIP00000005740
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.965
ENSACIP00000029118
Zgc:153681.
    
 0.965
ENSACIP00000016060
Ribonucleic acid export 1.
    
 0.959
RANBP2
RAN binding protein 2.
   
 0.957
ENSACIP00000006282
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.957
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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